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文檔簡介
The
Need
for
SpeedThe
PDF‐4+
database
is
designed
to
handle
very
large
amouof
data
and
provide
the
user
with
an
ability
to
performextensive
data
mining.The
database
also
incorporates
many
sophisticated
algoricalculate,
analyze
and
display
diffraction
data.By
design,
speed
is
sacrificed
whenever
there
is
a
trade‐obetween
speed
and
capability.
However
speedimprovements
are
made
annually
and
this
tutorial
gives
mhelpful
hints
on
how
to
improve
speed
for
anydatabase
product.Speed
Gobblers(Speed
bumps)Sophisticated
on‐the
fly
calculatInadequate
computer
hardware
Sorts
and
searches
producing
orusing
very
large
tablesSpeed
Accelerators(Turbo)Smaller
data
sets
Targeted
and
selective
(smaller)searproducing
small
tablesSpeed
BasicsThe
processorand
system
memory
control
the
overall
speed
of
the
databaseand
searches
that
use
the
database.
If
you
exceed
the
specifications
the
systework
faster,
if
you
do
not
meet
the
specifications
certain
operations
will
worslowly
or
notwork
at
all.Search
SpeedsThere
are
several
search
speeds
given
in
this
presentation.These
were
given
to
present
the
reader
with
a
concept
of
relative
spfor
several
types
of
searches.Your
search
times
may
vary
depending
on
the
exact
computer
specificaof
your
PC.The
PC
used
in
these
tests
was32‐bit
with
a
Vista?
operating
system2
GB
RAM
and
2.00
GHz
dual
core
processor.How
fast
is
this
spinning
?The
diffraction
patterns
should
besmooth
and
continuously
drawn.The
shark
should
swimin
a
full
circle
in
underone
second.Speed
Basics
All
Release
2006
and
later
PDF‐2
and
PDF‐databases
use
Sybase
as
a
database
platformand
use
JAVA
as
a
software
platform.
iAnywhere,
the
producer
of
Sybase,
ICDD,
aJAVA
all
continuously
upgrade
their
systemimprove
search
speeds.
You
should
see
fastespeeds
with
each
product
release,
if
youdocomparative
analysis.Database
Search
OptionsSearch
OptionsRelease
2009PDF‐4+PDF‐253
Searches,
291,440
Data
Set49
Searches,
218,610
Data
SetSearchPDF‐4/Organics48
Searches,
370,844
Data
SetSearches
can
be
combined.DisplayDisplay
OptionsPDF‐4+
85
Display
FieldsPDF‐2
24
Display
FieldsDefault
page
displays
8
fields.
This
can
bereduced
to
1
or
expanded
to
all
fields.Search
Speed
–
Size
of
the
SearchThe
larger
the
search,
the
slower
the
speed.Display
all
fields
(85)
on
all
Inorganic
materials[
85
X
262,365
=
22,301,025
Fields
in
the
table]Search
takes
a
minuteDisplay
default
fields
(8)
onall
Inorganic
Materials[
8
x
262,365
=
2,098,920
Fields
in
the
table]Search
takes
~
23.8
SecondsDisplay
PDF#,
chemical
and
mineral
name
for
allZeolites[
3
x
3,155
=
9,465
Fields
in
the
table
]Search
takes
~
Blink
of
the
eye
(0.4
Seconds)HistoryThe
history
panel
tracks
the
search
speeSearches
3
to
5,
displayed
3
fields
for
each
entry
so
the
time
is
directly
relatto
the
number
of
entries
“hit”.
Search
6
at
94.4
secondswas
identical
to
sea5
(8.8
seconds),
except
that44fields
were
displayed
instead
of
3.No.
of
entriesSearchspeedLarge
Calculations
Slow
Things
DoIntegral
IndexIntegral
Index
–
does
a
point
by
point
comparison
of
imported
diffraction
pin
comparison
to
dynamically
generated
experimental
and
calculated
pattern(see
tutorial
on
integral
index).Each
pattern
is
thousands
of
points,
so
if
large
collections
of
patterns
are
uthe
calculation,
then
the
integral
index
calculation
takes
time.Digital
Pattern
CalculationsFor
digital
patterns,
three
algorithms
are
used
depending
on
the
type
of
dataavailable
in
the
reference
material.
The
most
resource‐intensive
algorithcalculations
of
patterns
from
atomic
coordinates.
Calculation
of
a
single
pis
done
in
less
than
a
second.
Calculation
of
thousands
of
patterns
takes
minuResults
FormIn
this
example,
six
entries
were
highlightedand
a
“click”the
right
hand
button
of
the
mouse
produces
all
six
patterns,nearly
instantaneously.Digital
PatternsThis
calculation
of
77
superimposed
explosives
patterns
took
sevseconds.The
more
entries
in
the
calculation,
the
longer
it
takes.Capability
Trade
OffsDatabase
searches
are
frequently
used
for
data
mining.
Manydata
mining
examples
are
provided
in
the
tutorials.A
preferred
technique
in
data
mining
is
to
use
broad
search
parameters,analyze
the
results
and
then
apply
more
restrictions
as
you
find
materialsof
interest.
For
example,
a
researcher
might
analyze
all
zirconia‐contamaterials,
then
focus
on
yttria
or
ceria
stabilized
zirconia
and
then
reduthe
candidate
list
to
tetragonally
stabilized
zirconias,
if
they
werestudying
cutting
tool
compositions.To
be
effective
in
the
trade‐off
between
capability
and
speed,
one
mightwant
to
do
computationally
intensive
calculations
(i.e.
pattern
calculatIntegral
index)
in
the
later
stages
of
data
mining,
when
the
candidate
listhas
been
narrowed.Preference
Options
inSIeve+SIeve+This
is
the
preferencesTable
for
SIeve+.There
are
several
optionsthat
can
increase
or
decrethe
search
speed.Pattern
GOM
and
IntegralIndex
both
involve
time‐consuming
calculations.To
increase
speed,Toggle
these
off
by“point
and
click”.Search
Window0.15Match
Window0.15GOM
Limit2000No
of
Candidates5,885Time5
sec0.150.154000804<
1
sec0.060.06400010<<1
sec0.060.0610001,136<
1sec0.180.18100011,4505
sec0.180.0610004,1761
secSearch
and
Match
Windowsand
GOM
(Goodness
of
Match)The
wider
the
search
and
match
windows,
the
morecandidates
are
reviewed
andselected.
The
moredata
being
compiled
for
display,
the
slower
the
speed.This
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